C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137948 Ankrd29-003 ENSMUSG00000057766 10090 - 18:12252365-12271697 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000137948
Transcript ID Adipose Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000137948 1.128±0.00 0.479±0.00 1.419±0.00 0.238±0.10 0.067±0.05 0.126±0.05 0.839±0.47 0.321±0.13 0.057±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WW CIL_0005WW_0002 CGP 18:12189693-12305720
CIL_0005AV CIL_0005AV_0002 CGP 18:12252362-12583013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322980 ANKRD29-002 protein_coding Homo_sapiens 0 250
ENST00000586511 ANKRD29-006 processed_transcript Homo_sapiens 2e-28 130
ENST00000587763 ANKRD29-007 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000591280 ANKRD29-003 retained_intron Homo_sapiens 0 444
ENST00000591617 ANKRD29-005 retained_intron Homo_sapiens 2e-28 130
ENST00000592179 ANKRD29-001 protein_coding Homo_sapiens 0 446

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