C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138094 Limd2-004 ENSMUSG00000040699 10090 - 11:106158314-106159409 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMuscleOvaryPlacentaTestisENSMUST00000138094
Transcript ID Brain Breast Muscle Ovary Placenta Testis
ENSMUST00000138094 9.881±6.58 30.977±0.00 3.607±0.00 9.919±0.49 40.345±27.23 21.537±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839
CIL_0003AI CIL_0003AI_0003 CGP 11:106084613-106160860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259006 LIMD2-001 protein_coding Homo_sapiens 0 486
ENST00000578061 LIMD2-011 protein_coding Homo_sapiens 0 418
ENST00000578067 LIMD2-004 retained_intron Homo_sapiens 0 453
ENST00000578297 LIMD2-012 retained_intron Homo_sapiens 0 387
ENST00000578402 LIMD2-002 protein_coding Homo_sapiens 0 486
ENST00000578993 LIMD2-010 protein_coding Homo_sapiens 0 224
ENST00000579329 LIMD2-005 retained_intron Homo_sapiens 0 202
ENST00000579814 LIMD2-008 retained_intron Homo_sapiens 0 387
ENST00000580222 LIMD2-009 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000582055 LIMD2-006 protein_coding Homo_sapiens 0 431
ENST00000583211 LIMD2-003 protein_coding Homo_sapiens 0 497
ENST00000584645 LIMD2-007 protein_coding Homo_sapiens 0.0000000000002 81

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