C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitochondrial ribosomal protein L38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138457 Mrpl38-003 ENSMUSG00000020775 10090 - 11:116137782-116138865 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalPlacentaENSMUST00000138457
Transcript ID Adrenal Placenta
ENSMUST00000138457 19.146±2.82 2.900±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0003KG CIL_0003KG_0003 CGP 11:116121846-116138868

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309352 MRPL38-001 protein_coding Homo_sapiens 0 296
ENST00000410030 MRPL38-002 processed_transcript Homo_sapiens 0 296
ENST00000461602 MRPL38-004 retained_intron Homo_sapiens 0 315
ENST00000464758 MRPL38-003 retained_intron Homo_sapiens 0 315
ENST00000477736 MRPL38-009 retained_intron Homo_sapiens 0 267
ENST00000493104 MRPL38-005 retained_intron Homo_sapiens 0 283
ENST00000493383 MRPL38-006 retained_intron Homo_sapiens 0 267
ENST00000585475 MRPL38-016 processed_transcript Homo_sapiens 6.99949e-42 174
ENST00000590947 RP11-552F3.12-002 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000593156 RP11-552F3.12-001 retained_intron Homo_sapiens 0 222

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