C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4932438A13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138950 4932438A13Rik-002 ENSMUSG00000037270 10090 + 3:37011708-37053014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000138950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000138950 2.017±0.19 1.067±0.07 4.777±0.51 3.694±0.00 2.592±0.87 2.191±0.55 1.215±0.00 2.588±0.00 2.073±0.74 1.231±0.28 3.272±1.94 6.500±2.55 7.212±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AC CIL_0007AC_0002 CGP 3:36620482-37053033
CIL_0007AD CIL_0007AD_0002 CGP 3:36863106-37121924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000090000 si:ch211-233a24.2-201 protein_coding Danio_rerio 0 880
ENSDART00000134725 si:ch211-233a24.2-001 protein_coding Danio_rerio 0 880
ENSDART00000145834 si:ch211-233a24.2-003 retained_intron Danio_rerio 1e-38 167
ENST00000264501 KIAA1109-001 protein_coding Homo_sapiens 0 4409
ENST00000306802 KIAA1109-009 protein_coding Homo_sapiens 0 5720
ENST00000388738 KIAA1109-201 protein_coding Homo_sapiens 0 4409
ENST00000419325 KIAA1109-007 protein_coding Homo_sapiens 0 715
ENST00000438707 KIAA1109-010 protein_coding Homo_sapiens 0 6078
ENST00000442707 KIAA1109-008 protein_coding Homo_sapiens 0 669
ENST00000480651 KIAA1109-013 retained_intron Homo_sapiens 0 878
ENST00000483357 KIAA1109-014 processed_transcript Homo_sapiens 0 444
ENST00000491933 KIAA1109-015 retained_intron Homo_sapiens 0 658

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