C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138741-ENSG00000138688 CGP 9606 4:121879027-122362758
GeneTranscriptPositionBiotype
ENSG00000138688 (KIAA1109)
KIAA1109 		ENST00000264501 (KIAA1109-001) 122152333-122362752 protein_coding
ENST00000306802 (KIAA1109-009) 122324464-122362752 protein_coding
ENST00000388738 (KIAA1109-201) 122170603-122362758 protein_coding
ENST00000419325 (KIAA1109-007) 122254859-122325784 protein_coding
ENST00000421930 (KIAA1109-011) 122309266-122316794 protein_coding
ENST00000424425 (KIAA1109-004) 122186181-122239929 protein_coding
ENST00000438707 (KIAA1109-010) 122309365-122362750 protein_coding
ENST00000442707 (KIAA1109-008) 122339221-122344611 protein_coding
ENST00000446180 (KIAA1109-006) 122239965-122276189 protein_coding
ENST00000449251 (KIAA1109-003) 122219469-122229195 protein_coding
ENST00000470182 (KIAA1109-012) 122246220-122247688 retained_intron
ENST00000480651 (KIAA1109-013) 122327872-122333809 retained_intron
ENST00000482114 (KIAA1109-002) 122209174-122227747 retained_intron
ENST00000483357 (KIAA1109-014) 122336093-122337147 processed_transcript
ENST00000491933 (KIAA1109-015) 122348913-122349978 retained_intron
ENST00000495260 (KIAA1109-005) 122196749-122239929 processed_transcript
ENSG00000138741 (TRPC3)
transient receptor potential cation channel, subfamily C, member 3 		ENST00000264811 (TRPC3-001) 121879027-121933457 protein_coding
ENST00000379645 (TRPC3-002) 121879028-121951754 protein_coding
ENST00000502968 (TRPC3-003) 121932760-121950874 protein_coding
ENST00000506449 (TRPC3-004) 121879716-121933113 nonsense_mediated_decay
ENST00000513531 (TRPC3-005) 121879736-121933038 protein_coding
ENSG00000241037 (RN7SL335P)
RNA, 7SL, cytoplasmic 335, pseudogene 		ENST00000482790 (RN7SL335P-201) 122087508-122087811 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007AC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027716-ENSMUSG00000037270 CGP 10090 3:36620482-37053033
GeneTranscriptPositionBiotype
ENSMUSG00000027716 (Trpc3)
transient receptor potential cation channel, subfamily C, member 3 		ENSMUST00000029271 (Trpc3-001) 36620482-36690167 protein_coding
ENSMUST00000123220 (Trpc3-004) 36620562-36621361 processed_transcript
ENSMUST00000129322 (Trpc3-003) 36620562-36621339 processed_transcript
ENSMUST00000133542 (Trpc3-005) 36638356-36640620 retained_intron
ENSMUST00000146475 (Trpc3-002) 36669203-36690167 processed_transcript
ENSMUSG00000037270 (4932438A13Rik)
RIKEN cDNA 4932438A13 gene 		ENSMUST00000057272 (4932438A13Rik-201) 36863106-37053033 protein_coding
ENSMUST00000108145 (4932438A13Rik-017) 36864469-36932026 retained_intron
ENSMUST00000123916 (4932438A13Rik-011) 36863121-36943396 retained_intron
ENSMUST00000128061 (4932438A13Rik-005) 36895373-36948154 nonsense_mediated_decay
ENSMUST00000129721 (4932438A13Rik-013) 36870011-36889052 retained_intron
ENSMUST00000129787 (4932438A13Rik-016) 36890819-36895463 retained_intron
ENSMUST00000136287 (4932438A13Rik-012) 36863121-36889045 retained_intron
ENSMUST00000136746 (4932438A13Rik-010) 37037823-37040880 retained_intron
ENSMUST00000138152 (4932438A13Rik-003) 37014504-37030026 protein_coding
ENSMUST00000138950 (4932438A13Rik-002) 37011708-37053014 protein_coding
ENSMUST00000139219 (4932438A13Rik-015) 36946221-36948149 retained_intron
ENSMUST00000140480 (4932438A13Rik-007) 37018856-37023854 retained_intron
ENSMUST00000141740 (4932438A13Rik-009) 37011577-37053016 protein_coding
ENSMUST00000143675 (4932438A13Rik-014) 36908148-36920148 retained_intron
ENSMUST00000146948 (4932438A13Rik-006) 37007186-37053015 protein_coding
ENSMUST00000148698 (4932438A13Rik-004) 37024426-37037840 retained_intron
ENSMUST00000152564 (4932438A13Rik-001) 36869998-37053033 protein_coding
ENSMUST00000152881 (4932438A13Rik-008) 36863156-36948152 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AC_0001ENSG00000138688ENST00000264501ENST00000306802ENST00000388738ENST00000419325ENST00000421930ENST00000424425ENST00000438707ENST00000442707ENST00000446180ENST00000449251ENST00000470182ENST00000480651ENST00000482114ENST00000483357ENST00000491933ENST00000495260ENSG00000138741ENST00000264811ENST00000379645ENST00000502968ENST00000506449ENST00000513531ENSG00000241037ENST00000482790CIL_0007AC_0002ENSMUSG00000027716ENSMUST00000029271ENSMUST00000123220ENSMUST00000129322ENSMUST00000133542ENSMUST00000146475ENSMUSG00000037270ENSMUST00000057272ENSMUST00000108145ENSMUST00000123916ENSMUST00000128061ENSMUST00000129721ENSMUST00000129787ENSMUST00000136287ENSMUST00000136746ENSMUST00000138152ENSMUST00000138950ENSMUST00000139219ENSMUST00000140480ENSMUST00000141740ENSMUST00000143675ENSMUST00000146948ENSMUST00000148698ENSMUST00000152564ENSMUST00000152881
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AC_0001ENSG00000138688ENST00000264501ENST00000306802ENST00000388738ENST00000419325ENST00000424425ENST00000438707ENST00000446180ENSG00000138741ENST00000264811ENST00000379645ENST00000506449ENST00000513531ENSG00000241037ENST00000482790CIL_0007AC_0002ENSMUSG00000027716ENSMUST00000029271ENSMUST00000123220ENSMUST00000133542ENSMUST00000146475ENSMUSG00000037270ENSMUST00000057272ENSMUST00000123916ENSMUST00000138950ENSMUST00000141740ENSMUST00000146948ENSMUST00000148698ENSMUST00000152564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138688 ENST00000264501 N/A 0.773±0.00 1.405±0.00 3.955±2.21 N/A N/A 0.804±0.00 N/A N/A 2.710±2.16 N/A 1.896±0.00 0.138±0.00 1.608±0.32
ENST00000306802 3.877±0.00 3.080±0.00 N/A 5.789±0.00 4.595±0.00 3.178±0.00 3.571±0.00 7.122±0.00 1.258±0.00 2.804±0.00 3.539±0.43 6.766±0.47 0.982±0.32 3.650±0.00
ENST00000388738 1.124±0.00 N/A N/A 2.324±0.00 2.268±1.17 2.393±1.27 0.890±0.00 0.797±0.08 1.684±1.45 1.535±0.95 1.687±0.97 0.770±0.09 N/A 0.912±0.00
ENST00000419325 N/A N/A 4.655±0.00 N/A N/A 1.760±0.00 N/A 1.972±0.00 N/A N/A 1.059±0.00 3.428±0.00 0.570±0.16 4.656±1.80
ENST00000421930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424425 N/A N/A N/A N/A 7.899±0.00 N/A 3.713±0.00 N/A N/A N/A N/A 6.998±0.00 N/A N/A
ENST00000438707 2.530±0.00 0.971±0.00 3.890±0.00 4.510±0.00 2.506±0.00 2.525±0.00 N/A 3.246±0.63 0.793±0.00 1.251±0.00 N/A 2.667±0.67 0.742±0.61 7.996±4.07
ENST00000442707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446180 N/A N/A N/A N/A N/A 6.118±0.00 N/A N/A N/A 7.959±0.00 N/A N/A N/A N/A
ENST00000449251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138741 ENST00000264811 N/A N/A N/A 0.902±0.00 N/A N/A N/A N/A 0.087±0.00 0.215±0.00 N/A N/A N/A N/A
ENST00000379645 0.046±0.00 N/A N/A 0.460±0.00 N/A 0.026±0.00 0.048±0.00 0.084±0.00 N/A 0.154±0.00 N/A 0.064±0.04 0.115±0.02 0.082±0.00
ENST00000502968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506449 0.123±0.00 N/A 0.347±0.00 0.159±0.00 0.114±0.00 N/A N/A N/A 0.647±0.00 N/A 0.023±0.00 0.078±0.00 N/A 0.107±0.00
ENST00000513531 N/A 0.012±0.00 N/A N/A N/A N/A 0.013±0.00 0.082±0.04 N/A N/A N/A 0.042±0.00 0.145±0.10 0.128±0.00
ENSG00000241037 ENST00000482790 N/A N/A N/A N/A N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027716 ENSMUST00000029271 3.608±1.81 0.962±0.18 0.630±0.05 3.371±0.29 0.992±0.32 0.689±0.25 2.514±0.29 0.883±0.10 0.116±0.04 1.334±0.37 0.895±0.18 4.222±1.60 0.923±1.11 0.122±0.06
ENSMUST00000123220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.577±0.00 N/A
ENSMUST00000129322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.361±0.00
ENSMUST00000146475 N/A 0.566±0.00 N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A 1.294±0.47 N/A N/A
ENSMUSG00000037270 ENSMUST00000057272 0.950±0.16 1.045±0.30 0.788±0.11 1.421±0.30 1.511±0.52 0.735±0.18 0.861±0.27 1.469±0.34 0.483±0.11 2.232±0.70 0.469±0.16 0.799±0.26 1.534±0.00 4.840±0.07
ENSMUST00000108145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123916 N/A N/A N/A N/A N/A 1.870±0.42 N/A N/A 2.189±0.00 N/A N/A 2.004±0.00 N/A N/A
ENSMUST00000128061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138950 2.017±0.19 1.067±0.07 4.777±0.51 3.694±0.00 2.592±0.87 2.191±0.55 1.215±0.00 2.588±0.00 2.073±0.74 N/A 1.231±0.28 3.272±1.94 6.500±2.55 7.212±0.82
ENSMUST00000139219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141740 N/A N/A 1.987±0.41 8.395±0.79 N/A 1.614±0.50 1.485±0.50 N/A 1.019±0.09 2.331±0.00 3.125±0.53 N/A N/A 10.302±0.00
ENSMUST00000143675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146948 1.694±0.20 1.274±0.24 3.152±0.00 2.996±0.00 2.807±0.38 2.140±0.59 0.923±0.00 2.941±0.45 1.735±0.38 2.783±0.00 0.990±0.17 3.247±1.33 6.799±3.54 N/A
ENSMUST00000148698 N/A 3.203±0.00 N/A N/A N/A 2.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152564 1.629±0.00 N/A N/A 1.743±0.51 1.109±0.39 N/A 0.911±0.07 N/A 0.438±0.00 N/A 0.512±0.13 1.461±0.32 2.617±0.02 4.003±0.22
ENSMUST00000152881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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