C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139315 P4ha2-004 ENSMUSG00000018906 10090 + 11:54127693-54131665 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENSMUST00000139315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000139315 1.758±0.00 1.159±0.07 1.323±0.00 0.880±0.33 1.664±0.15 0.895±0.21 2.460±0.32 0.268±0.05 3.002±0.78 4.065±1.60 0.864±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000166534 P4HA2-003 protein_coding Homo_sapiens 0 316
ENST00000360568 P4HA2-002 protein_coding Homo_sapiens 0 316
ENST00000379086 P4HA2-004 protein_coding Homo_sapiens 0 316
ENST00000379100 P4HA2-201 protein_coding Homo_sapiens 0 316
ENST00000379104 P4HA2-202 protein_coding Homo_sapiens 0 316
ENST00000401867 P4HA2-001 protein_coding Homo_sapiens 0 316
ENST00000467587 P4HA2-008 retained_intron Homo_sapiens 0 289
ENST00000474628 P4HA2-007 retained_intron Homo_sapiens 0 237

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