C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATPase, H+ transporting, lysosomal V0 subunit A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139619 Atp6v0a1-006 ENSMUSG00000019302 10090 + 11:101010657-101020515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000139619
Transcript ID Placenta Testis
ENSMUST00000139619 35.113±0.00 19.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046F CIL_00046F_0002 CGP 11:100956733-101063719
CIL_00046D CIL_00046D_0002 CGP 11:101009452-101077672

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264649 ATP6V0A1-004 protein_coding Homo_sapiens 0 344
ENST00000343619 ATP6V0A1-006 protein_coding Homo_sapiens 0 344
ENST00000393829 ATP6V0A1-001 protein_coding Homo_sapiens 0 344
ENST00000537728 ATP6V0A1-003 protein_coding Homo_sapiens 0 344
ENST00000585525 ATP6V0A1-005 protein_coding Homo_sapiens 0 344
ENST00000587824 ATP6V0A1-012 protein_coding Homo_sapiens 0 344
ENST00000588629 ATP6V0A1-002 retained_intron Homo_sapiens 0 344
ENST00000588901 ATP6V0A1-015 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000589213 ATP6V0A1-013 protein_coding Homo_sapiens 0 344
ENST00000589727 ATP6V0A1-014 protein_coding Homo_sapiens 7e-38 161

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