C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343619 ATP6V0A1-006 ENSG00000033627 9606 + 17:42458888-42522611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryTestisENST00000343619
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000343619 5.120±0.00 2.721±0.00 33.554±4.67 3.982±0.00 3.722±0.00 0.780±0.25 1.235±0.00 2.484±0.29 3.861±0.00 2.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046F CIL_00046F_0001 CGP 17:42402452-42522611
CIL_00046D CIL_00046D_0001 CGP 17:42458844-42544449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006879 TAS cellular iron ion homeostasis
GO:0008286 TAS insulin receptor signaling pathway
GO:0010008 TAS endosome membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0030670 TAS phagocytic vesicle membrane
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0033572 TAS transferrin transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0051117 IPI ATPase binding
GO:0051701 TAS interaction with host
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044721 Atp6v0a1-001 protein_coding Mus_musculus 0 3169
ENSMUST00000168757 Atp6v0a1-201 protein_coding Mus_musculus 0 3109
ENSMUST00000092663 Atp6v0a1-003 protein_coding Mus_musculus 0 3051
ENSMUST00000103110 Atp6v0a1-002 protein_coding Mus_musculus 0 2933
ENSMUST00000154896 Atp6v0a1-004 processed_transcript Mus_musculus 0 1574
ENSDART00000041714 atp6v0a1b-001 protein_coding Danio_rerio 0 1155
ENSMUST00000139857 Atp6v0a1-009 processed_transcript Mus_musculus 0 737
ENSMUST00000151554 Atp6v0a1-005 processed_transcript Mus_musculus 0 617
ENSMUST00000139619 Atp6v0a1-006 protein_coding Mus_musculus 0 344
ENSMUST00000127810 Atp6v0a1-008 processed_transcript Mus_musculus 0 303

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