C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537728 ATP6V0A1-003 ENSG00000033627 9606 + 17:42458878-42521394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryPlacentaTestisENST00000537728
Transcript ID Bladder Colon Ovary Placenta Testis
ENST00000537728 3.090±0.00 4.530±0.00 4.260±0.00 3.324±0.00 2.648±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046F CIL_00046F_0001 CGP 17:42402452-42522611
CIL_00046D CIL_00046D_0001 CGP 17:42458844-42544449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092663 Atp6v0a1-003 protein_coding Mus_musculus 0 2531
ENSMUST00000103110 Atp6v0a1-002 protein_coding Mus_musculus 0 2488
ENSMUST00000168757 Atp6v0a1-201 protein_coding Mus_musculus 0 2453
ENSMUST00000044721 Atp6v0a1-001 protein_coding Mus_musculus 0 2453
ENSMUST00000154896 Atp6v0a1-004 processed_transcript Mus_musculus 0 1574
ENSDART00000041714 atp6v0a1b-001 protein_coding Danio_rerio 0 837
ENSMUST00000139857 Atp6v0a1-009 processed_transcript Mus_musculus 0 737
ENSMUST00000151554 Atp6v0a1-005 processed_transcript Mus_musculus 0 429
ENSMUST00000139619 Atp6v0a1-006 protein_coding Mus_musculus 0 344
ENSMUST00000127810 Atp6v0a1-008 processed_transcript Mus_musculus 0 303

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