C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | family with sequence similarity 78, member A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000139629  |
Fam78a-004 |
ENSMUSG00000050592 |
10090 | - |
2:32050055-32084669  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088E | CIL_00088E_0002 | VISTA | 2:31827730-32428586 |
| CIL_0006IL | CIL_0006IL_0002 | CGP | 2:31950260-32053975 |
| CIL_0002EO | CIL_0002EO_0003 | CGP | 2:31974436-32084857 |
| CIL_0002VI | CIL_0002VI_0003 | CGP | 2:32050055-32110820 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000124587
|
fam78ab-201 | protein_coding | Danio_rerio | 0 | 324 |
|
ENST00000247295
|
FAM78A-003 | processed_transcript | Homo_sapiens | 0 | 784 |
|
ENST00000372269
|
FAM78A-002 | protein_coding | Homo_sapiens | 0 | 782 |
|
ENST00000372271
|
FAM78A-001 | protein_coding | Homo_sapiens | 0 | 1469 |
|
ENST00000464831
|
FAM78A-004 | protein_coding | Homo_sapiens | 0 | 782 |
