C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell leukemia/lymphoma 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139680 Bcl3-004 ENSMUSG00000053175 10090 - 7:19811586-19822157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleOvaryPlacentaENSMUST00000139680
Transcript ID Brain Heart Muscle Ovary Placenta
ENSMUST00000139680 0.237±0.00 2.447±0.28 0.234±0.00 7.017±0.05 1.451±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002268 IMP follicular dendritic cell differentiation
GO:0002315 IMP marginal zone B cell differentiation
GO:0002455 IMP humoral immune response mediated by circulating immunoglobulin
GO:0002467 IMP germinal center formation
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0019730 IMP antimicrobial humoral response
GO:0030198 IMP extracellular matrix organization
GO:0032729 IMP positive regulation of interferon-gamma production
GO:0042088 IMP T-helper 1 type immune response
GO:0042536 IMP negative regulation of tumor necrosis factor biosynthetic process
GO:0042742 IMP defense response to bacterium
GO:0042832 IMP defense response to protozoan
GO:0043066 IGI negative regulation of apoptotic process
GO:0045064 IMP T-helper 2 cell differentiation
GO:0045082 IMP positive regulation of interleukin-10 biosynthetic process
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048536 IMP spleen development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000164227 BCL3-001 protein_coding Homo_sapiens 0 289
ENST00000403534 BCL3-003 retained_intron Homo_sapiens 0 289
ENST00000444487 BCL3-005 protein_coding Homo_sapiens 0 241
ENST00000464319 BCL3-007 retained_intron Homo_sapiens 6.00036e-42 174
ENST00000473468 BCL3-004 processed_transcript Homo_sapiens 8.00001e-42 174

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