| Transcript ID | Testis |
|---|---|
| ENSMUST00000139720 | 0.157±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | parvin, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000139720  |
Parva-003 |
ENSMUSG00000030770 |
10090 | + |
7:112427905-112552929  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008T3 | CIL_0008T3_0002 | VISTA | 7:111980454-112581088 |
| CIL_0008YS | CIL_0008YS_0002 | VISTA | 7:111997825-112599422 |
| CIL_0007SQ | CIL_0007SQ_0002 | VISTA | 7:112051476-112653289 |
| CIL_0003PF | CIL_0003PF_0002 | CGP | 7:112368308-112591692 |
| CIL_0003PG | CIL_0003PG_0002 | CGP | 7:112427505-112906807 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IDA | actin binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005925 | IDA | focal adhesion |
| GO:0007155 | IDA | cell adhesion |
| GO:0030027 | IDA | lamellipodium |
| GO:0031532 | IEA | actin cytoskeleton reorganization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000104069
|
parvaa-201 | protein_coding | Danio_rerio | 0 | 204 |
|
ENSDART00000064187
|
parvaa-001 | protein_coding | Danio_rerio | 0 | 204 |
