C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple EGF-like-domains 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139892 Megf10-002 ENSMUSG00000024593 10090 + 18:57142786-57292728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139892
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139892 0.047±0.03 0.219±0.11 0.051±0.03 0.110±0.05 0.113±0.01 0.034±0.00 0.030±0.00 0.063±0.04 0.064±0.00 3.274±0.89 0.008±0.00 0.088±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S2 CIL_0007S2_0002 VISTA 18:56596918-57198991
CIL_0006CT CIL_0006CT_0003 CGP 18:56955833-57297467
CIL_0000H5 CIL_0000H5_0003 CGP 18:57133090-57392719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001891 IDA phagocytic cup
GO:0003674 ND molecular_function
GO:0014719 IMP skeletal muscle satellite cell activation
GO:0014816 IMP skeletal muscle satellite cell differentiation
GO:0014841 IDA skeletal muscle satellite cell proliferation
GO:0016021 IEA integral component of membrane
GO:0034109 ISS homotypic cell-cell adhesion
GO:0042995 IEA cell projection
GO:0043654 IDA recognition of apoptotic cell
GO:0051147 ISS regulation of muscle cell differentiation
GO:0055001 ISS muscle cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274473 MEGF10-001 protein_coding Homo_sapiens 0 3783
ENST00000418761 MEGF10-002 protein_coding Homo_sapiens 0 2021
ENST00000503335 MEGF10-004 protein_coding Homo_sapiens 0 3735
ENST00000506709 MEGF10-007 processed_transcript Homo_sapiens 0 656
ENST00000508365 MEGF10-003 protein_coding Homo_sapiens 0 1973

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