C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and tensin homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140014 Pten-002 ENSMUSG00000013663 10090 + 19:32757595-32802843 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000140014
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000140014 33.476±13.49 14.737±9.57 18.079±2.29 3.296±1.50 3.976±0.00 10.701±3.61 21.199±6.96 2.084±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001S4 CIL_0001S4_0002 CGP 19:32757497-33392295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079138 ptenb-002 protein_coding Danio_rerio 0 433
ENSDART00000079144 ptenb-001 protein_coding Danio_rerio 0 433
ENST00000371953 PTEN-001 protein_coding Homo_sapiens 0 2004
ENST00000447117 PTENP1-001 transcribed_processed_pseudogene Homo_sapiens 0 813
ENST00000462694 PTEN-003 retained_intron Homo_sapiens 0 300
ENST00000487939 PTEN-002 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000498703 PTEN-004 retained_intron Homo_sapiens 0 560
ENST00000532280 PTENP1-002 processed_transcript Homo_sapiens 0 1561
ENST00000610634 PTEN-201 protein_coding Homo_sapiens 0 2004
ENST00000618586 PTEN-006 processed_transcript Homo_sapiens 2e-16 92

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