C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001S4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171862-ENSG00000184719 CGP 9606 10:87863113-88584530
GeneTranscriptPositionBiotype
ENSG00000171862 (PTEN)
phosphatase and tensin homolog 		ENST00000371953 (PTEN-001) 87863113-87971930 protein_coding
ENST00000462694 (PTEN-003) 87864468-87894326 retained_intron
ENST00000472832 (PTEN-005) 87952199-87961309 protein_coding
ENST00000487939 (PTEN-002) 87864449-87867049 processed_transcript
ENST00000498703 (PTEN-004) 87925523-87933487 retained_intron
ENST00000610634 (PTEN-201) 87863438-87942691 protein_coding
ENST00000618586 (PTEN-006) 87864501-87866081 processed_transcript
ENSG00000184719 (RNLS)
renalase, FAD-dependent amine oxidase 		ENST00000331772 (RNLS-002) 88284959-88583213 protein_coding
ENST00000371947 (RNLS-001) 88273864-88584530 protein_coding
ENST00000437752 (RNLS-201) 88572904-88583190 protein_coding
ENST00000466945 (RNLS-003) 88314513-88583332 processed_transcript
ENST00000481793 (RNLS-004) 88362552-88583330 processed_transcript
ENSG00000213613 (RP11-380G5.3)
 ENST00000395256 (RP11-380G5.3-001) 87945502-87946024 processed_pseudogene
ENSG00000224745 (RP11-380G5.2)
 ENST00000416679 (RP11-380G5.2-001) 87878692-87880427 sense_intronic
ENSG00000275015 (RP11-129G17.2)
 ENST00000610667 (RP11-129G17.2-001) 88259129-88259372 unprocessed_pseudogene
CIL_0001S4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013663-ENSMUSG00000071573 CGP 10090 19:32757497-33392295
GeneTranscriptPositionBiotype
ENSMUSG00000013663 (Pten)
phosphatase and tensin homolog 		ENSMUST00000013807 (Pten-001) 32757497-32826160 protein_coding
ENSMUST00000140014 (Pten-002) 32757595-32802843 retained_intron
ENSMUST00000154806 (Pten-003) 32811225-32817977 retained_intron
ENSMUSG00000071573 (Rnls)
renalase, FAD-dependent amine oxidase 		ENSMUST00000096114 (Rnls-001) 33137747-33392265 protein_coding
ENSMUST00000163093 (Rnls-201) 33137747-33392295 protein_coding
ENSMUSG00000084512 (Gm22482)
predicted gene, 22482 		ENSMUST00000122563 (Gm22482-201) 32969950-32970308 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001S4_0001ENSG00000171862ENST00000371953ENST00000462694ENST00000472832ENST00000487939ENST00000498703ENST00000610634ENST00000618586ENSG00000184719ENST00000331772ENST00000371947ENST00000437752ENST00000466945ENST00000481793ENSG00000213613ENST00000395256ENSG00000224745ENST00000416679ENSG00000275015ENST00000610667CIL_0001S4_0002ENSMUSG00000013663ENSMUST00000013807ENSMUST00000140014ENSMUST00000154806ENSMUSG00000071573ENSMUST00000096114ENSMUST00000163093ENSMUSG00000084512ENSMUST00000122563
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001S4_0001ENSG00000171862ENST00000371953ENST00000472832ENST00000498703ENST00000610634ENSG00000184719ENST00000331772ENST00000371947ENST00000437752ENST00000466945ENST00000481793ENSG00000213613ENST00000395256ENSG00000224745ENST00000416679ENSG00000275015ENST00000610667CIL_0001S4_0002ENSMUSG00000013663ENSMUST00000013807ENSMUST00000140014ENSMUSG00000071573ENSMUST00000096114ENSMUST00000163093ENSMUSG00000084512ENSMUST00000122563
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171862 ENST00000371953 13.583±0.00 7.574±0.00 3.365±0.00 7.696±1.36 8.890±1.38 9.846±0.65 5.160±0.72 9.964±0.16 7.562±3.61 5.679±0.00 3.176±1.98 7.509±2.57 6.367±0.72 7.455±3.31
ENST00000462694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472832 N/A N/A 9.598±0.00 N/A 13.702±0.00 N/A N/A N/A N/A N/A N/A N/A 16.671±3.62 17.802±0.00
ENST00000487939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498703 N/A N/A 23.361±0.00 47.208±0.00 26.322±0.00 64.688±0.00 N/A 59.635±0.00 45.563±0.00 56.853±0.00 7.115±0.00 69.444±0.00 N/A N/A
ENST00000610634 N/A N/A N/A N/A 9.706±0.00 N/A N/A N/A 17.209±0.00 N/A N/A 12.572±0.00 11.485±3.09 33.266±0.00
ENST00000618586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184719 ENST00000331772 N/A 1.884±0.00 0.933±0.00 1.030±0.00 0.195±0.00 1.054±0.21 3.442±0.00 1.628±0.81 0.843±0.45 0.902±0.00 0.524±0.00 1.626±1.11 0.787±0.27 1.198±0.66
ENST00000371947 0.111±0.00 N/A 0.121±0.00 0.658±0.00 0.239±0.10 0.128±0.00 0.459±0.36 0.078±0.00 0.354±0.00 N/A 0.195±0.00 0.243±0.13 0.091±0.00 0.201±0.00
ENST00000437752 1.153±0.00 N/A N/A N/A N/A N/A 0.990±0.00 N/A N/A N/A N/A 0.194±0.00 N/A 1.342±0.00
ENST00000466945 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.949±0.00 1.055±0.00 N/A 0.766±0.00 N/A
ENST00000481793 0.805±0.00 N/A N/A N/A 3.150±0.00 N/A N/A N/A N/A N/A N/A N/A 0.833±0.00 N/A
ENSG00000213613 ENST00000395256 2.101±0.00 2.414±0.00 1.605±0.00 0.949±0.15 0.969±0.70 2.653±2.26 0.681±0.32 0.532±0.32 1.851±1.80 3.591±1.22 0.300±0.11 0.774±0.32 0.277±0.06 0.987±0.18
ENSG00000224745 ENST00000416679 0.564±0.00 0.807±0.00 N/A 0.166±0.02 0.547±0.42 0.083±0.00 0.159±0.00 0.195±0.01 0.374±0.26 N/A N/A 0.376±0.36 0.100±0.00 0.326±0.07
ENSG00000275015 ENST00000610667 N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000013663 ENSMUST00000013807 14.816±1.96 3.741±0.69 9.081±3.78 10.486±1.29 8.809±1.64 5.313±0.83 5.868±0.35 9.551±0.79 8.835±4.78 13.749±1.09 3.669±0.29 6.394±2.29 5.454±1.95 9.720±2.62
ENSMUST00000140014 N/A 33.476±13.49 N/A N/A 14.737±9.57 18.079±2.29 N/A 3.296±1.50 3.976±0.00 10.701±3.61 N/A 21.199±6.96 N/A 2.084±1.14
ENSMUST00000154806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000071573 ENSMUST00000096114 0.775±0.19 N/A N/A 0.075±0.00 0.511±0.00 0.602±0.03 3.259±1.34 1.006±0.44 0.250±0.12 1.267±0.10 2.507±0.32 0.709±0.18 0.249±0.16 69.763±34.31
ENSMUST00000163093 0.812±0.08 N/A 0.821±0.00 0.089±0.00 1.057±0.34 0.717±0.04 2.503±1.49 0.794±0.08 0.422±0.31 N/A 0.651±0.00 0.766±0.51 0.252±0.11 0.952±0.00
ENSMUSG00000084512 ENSMUST00000122563 0.496±0.11 0.581±0.10 N/A N/A 0.644±0.13 0.257±0.01 N/A 0.135±0.00 0.161±0.00 0.164±0.00 N/A 0.663±0.27 0.144±0.00 N/A

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