C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin and metallopeptidase domain 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140205 Adam10-002 ENSMUSG00000054693 10090 + 9:70678997-70778382 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyOvaryPlacentaTestisENSMUST00000140205
Transcript ID Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENSMUST00000140205 2.579±0.71 9.959±0.00 2.426±0.03 1.957±0.00 2.186±0.24 10.250±6.59 26.039±0.00 2.045±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MN CIL_0008MN_0002 VISTA 9:70534536-71135234
CIL_0004P1 CIL_0004P1_0002 CGP 9:70678997-70934808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0006509 IEA membrane protein ectodomain proteolysis
GO:0007219 IEA Notch signaling pathway
GO:0008270 IEA zinc ion binding
GO:0014069 IDA postsynaptic density

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099639 adam10a-001 protein_coding Danio_rerio 0 270
ENST00000260408 ADAM10-001 protein_coding Homo_sapiens 0 3382
ENST00000396136 ADAM10-002 nonsense_mediated_decay Homo_sapiens 0 2551
ENST00000402627 ADAM10-006 protein_coding Homo_sapiens 0 353
ENST00000439637 ADAM10-010 protein_coding Homo_sapiens 0 597
ENST00000461408 ADAM10-003 protein_coding Homo_sapiens 6e-23 113
ENST00000462061 ADAM10-005 retained_intron Homo_sapiens 0 355
ENST00000470269 ADAM10-007 retained_intron Homo_sapiens 0 621
ENST00000475898 ADAM10-011 processed_transcript Homo_sapiens 0 468
ENST00000481164 ADAM10-004 retained_intron Homo_sapiens 0 215
ENST00000482945 ADAM10-008 retained_intron Homo_sapiens 0 994
ENST00000497846 ADAM10-009 processed_transcript Homo_sapiens 0 747
ENST00000558004 ADAM10-013 protein_coding Homo_sapiens 0 403
ENST00000558733 ADAM10-015 processed_transcript Homo_sapiens 0 959
ENST00000559053 ADAM10-016 protein_coding Homo_sapiens 0 525
ENST00000560608 ADAM10-014 processed_transcript Homo_sapiens 0 401
ENST00000561149 ADAM10-012 processed_transcript Homo_sapiens 0 355
ENST00000561288 ADAM10-017 protein_coding Homo_sapiens 0 355

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