C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140563 Mmadhc-005 ENSMUSG00000026766 10090 - 2:50287853-50296676 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverENSMUST00000140563
Transcript ID Adipose Adrenal Liver
ENSMUST00000140563 5.479±0.00 26.758±5.51 8.757±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E0 CIL_0007E0_0002 CGP 2:50066429-50296801
CIL_0007DZ CIL_0007DZ_0002 CGP 2:50279881-51149111

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303319 MMADHC-006 protein_coding Homo_sapiens 0 651
ENST00000422782 MMADHC-004 protein_coding Homo_sapiens 0 651
ENST00000423224 RP11-322A17.1-001 processed_pseudogene Homo_sapiens 6e-32 141
ENST00000428879 MMADHC-001 protein_coding Homo_sapiens 0 651
ENST00000531489 RP1-145M24.1-001 processed_pseudogene Homo_sapiens 0 521

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