C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141057 Tmem5-005 ENSMUSG00000034620 10090 - 10:122089022-122096136 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000141057
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000141057 1.968±0.00 2.210±0.33 4.167±0.51 11.530±0.27 14.193±6.49 2.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YB CIL_0006YB_0002 CGP 10:121780991-122097371

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261234 TMEM5-001 protein_coding Homo_sapiens 0 638
ENST00000536219 TMEM5-006 retained_intron Homo_sapiens 0 278
ENST00000537373 TMEM5-003 protein_coding Homo_sapiens 0 638
ENST00000537982 TMEM5-007 processed_transcript Homo_sapiens 0 244
ENST00000543342 TMEM5-002 nonsense_mediated_decay Homo_sapiens 0 468

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