C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141058 Arhgap26-008 ENSMUSG00000036452 10090 + 18:39296785-39360930 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyOvaryTestisENSMUST00000141058
Transcript ID Adipose Breast Kidney Ovary Testis
ENSMUST00000141058 3.142±0.11 6.170±0.65 4.581±1.03 6.049±0.91 7.306±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274498 ARHGAP26-001 protein_coding Homo_sapiens 0 494
ENST00000378004 ARHGAP26-008 protein_coding Homo_sapiens 0 492
ENST00000418236 ARHGAP26-020 protein_coding Homo_sapiens 0 305
ENST00000419676 ARHGAP26-019 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000421521 ARHGAP26-012 protein_coding Homo_sapiens 0 191
ENST00000424007 ARHGAP26-018 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000425417 ARHGAP26-013 protein_coding Homo_sapiens 5.60519e-45 185
ENST00000443674 ARHGAP26-021 protein_coding Homo_sapiens 0 536
ENST00000489924 ARHGAP26-010 retained_intron Homo_sapiens 0 287

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