C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141268 Eef1d-010 ENSMUSG00000055762 10090 - 15:75896281-75909319 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000141268
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000141268 20.425±8.62 25.976±3.35 15.076±6.09 14.780±0.29 43.689±7.86 17.047±3.47 52.826±58.11 16.512±3.21 51.716±0.00 54.258±22.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0003C6 CIL_0003C6_0002 CGP 15:75890964-75909556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005853 IEA eukaryotic translation elongation factor 1 complex
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395119 EEF1D-002 protein_coding Homo_sapiens 0 300
ENST00000428783 EEF1DP3-001 processed_transcript Homo_sapiens 0 231
ENST00000490410 EEF1DP3-002 retained_intron Homo_sapiens 0 231
ENST00000526838 EEF1D-005 protein_coding Homo_sapiens 0 300
ENST00000528610 EEF1D-004 protein_coding Homo_sapiens 0 195
ENST00000529007 EEF1D-009 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000530848 EEF1D-018 retained_intron Homo_sapiens 0 300
ENST00000531621 EEF1D-020 protein_coding Homo_sapiens 0 195
ENST00000532400 EEF1D-016 protein_coding Homo_sapiens 0 195
ENST00000533833 EEF1D-010 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000585891 EEF1DP1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000614575 EEF1D-205 protein_coding Homo_sapiens 0 195

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