C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol phosphate dehydrogenase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141536 Gpd2-002 ENSMUSG00000026827 10090 + 2:57237635-57367853 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000141536
Transcript ID Testis
ENSMUST00000141536 39.807±9.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NB CIL_0007NB_0002 UCNEbase 2:56227555-57879432
CIL_000759 CIL_000759_0002 CGP 2:57106830-57370719
CIL_0008JK CIL_0008JK_0002 VISTA 2:57217307-57818247
CIL_000756 CIL_000756_0002 CGP 2:57237635-58045860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310454 GPD2-001 protein_coding Homo_sapiens 0 1408
ENST00000409125 GPD2-201 protein_coding Homo_sapiens 0 1009
ENST00000409674 GPD2-003 protein_coding Homo_sapiens 0 1286
ENST00000409861 GPD2-012 nonsense_mediated_decay Homo_sapiens 0 1286
ENST00000438166 GPD2-002 protein_coding Homo_sapiens 0 1290
ENST00000464846 GPD2-011 retained_intron Homo_sapiens 0 364
ENST00000492005 GPD2-009 processed_transcript Homo_sapiens 0 383
ENST00000496190 GPD2-010 processed_transcript Homo_sapiens 0 291
ENST00000540309 GPD2-202 protein_coding Homo_sapiens 0 1668
ENST00000587908 AC006116.22-001 processed_pseudogene Homo_sapiens 0 1022

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