C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymidylate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141630 Tyms-002 ENSMUSG00000025747 10090 - 5:30058202-30073581 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungMuscleOvaryPlacentaTestisENSMUST00000141630
Transcript ID Bladder Brain Breast Lung Muscle Ovary Placenta Testis
ENSMUST00000141630 0.379±0.00 0.464±0.31 0.528±0.15 0.517±0.00 0.050±0.01 0.828±0.42 0.077±0.00 0.055±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004799 IEA thymidylate synthase activity
GO:0006231 IEA dTMP biosynthetic process
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323224 TYMS-002 protein_coding Homo_sapiens 0 451
ENST00000323250 TYMS-003 protein_coding Homo_sapiens 0 566
ENST00000323274 TYMS-001 protein_coding Homo_sapiens 0 782
ENST00000383578 ENOSF1-201 protein_coding Homo_sapiens 6e-21 108
ENST00000579128 TYMS-006 retained_intron Homo_sapiens 0 335
ENST00000581920 TYMS-005 processed_transcript Homo_sapiens 0 580
ENST00000584259 ENOSF1-005 retained_intron Homo_sapiens 9e-21 108

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