C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142144 Slc6a13-002 ENSMUSG00000030108 10090 + 6:121300289-121303293 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000142144
Transcript ID Muscle
ENSMUST00000142144 0.455±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000097256 SLC6A13-201 protein_coding Danio_rerio 8e-32 141
ENST00000343164 SLC6A13-001 protein_coding Homo_sapiens 0 318
ENST00000359674 SLC6A12-001 protein_coding Homo_sapiens 7e-29 134
ENST00000397296 SLC6A12-201 protein_coding Homo_sapiens 7e-29 134
ENST00000424061 SLC6A12-002 protein_coding Homo_sapiens 8e-29 134
ENST00000436453 SLC6A13-002 protein_coding Homo_sapiens 0 324
ENST00000445055 SLC6A13-201 protein_coding Homo_sapiens 0 313
ENST00000536824 SLC6A12-004 protein_coding Homo_sapiens 5e-29 134
ENST00000536842 SLC6A13-008 retained_intron Homo_sapiens 0 318
ENST00000537793 SLC6A12-005 protein_coding Homo_sapiens 1e-29 134
ENST00000537826 SLC6A12-003 retained_intron Homo_sapiens 7e-32 141
ENST00000539260 SLC6A13-005 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000546319 SLC6A13-004 protein_coding Homo_sapiens 0 313

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