C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle-associated membrane protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142613 Vamp8-002 ENSMUSG00000050732 10090 - 6:72385228-72389911 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonOvaryTestisENSMUST00000142613
Transcript ID Adipose Adrenal Brain Breast Colon Ovary Testis
ENSMUST00000142613 2.098±0.00 3.764±0.45 0.271±0.01 3.849±0.00 4.551±0.12 2.898±0.42 0.378±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263864 VAMP8-001 protein_coding Homo_sapiens 0 361
ENST00000409760 VAMP8-003 protein_coding Homo_sapiens 4.00001e-41 172
ENST00000432071 VAMP8-002 protein_coding Homo_sapiens 0 333

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