C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FAD-dependent oxidoreductase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143039 Foxred1-004 ENSMUSG00000039048 10090 - 9:35204208-35210970 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000143039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143039 2.697±0.00 2.236±0.26 3.298±0.83 6.016±2.37 1.856±0.36 1.828±0.45 2.752±0.32 2.127±0.17 1.064±0.10 2.880±0.84 2.265±0.65 2.012±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017
CIL_0002HQ CIL_0002HQ_0002 CGP 9:35200175-35247973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263578 FOXRED1-002 protein_coding Homo_sapiens 0 1074
ENST00000525083 FOXRED1-004 retained_intron Homo_sapiens 0 412
ENST00000525770 FOXRED1-005 nonsense_mediated_decay Homo_sapiens 0 1072
ENST00000527004 FOXRED1-003 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000530642 FOXRED1-008 retained_intron Homo_sapiens 0 662
ENST00000532101 FOXRED1-010 retained_intron Homo_sapiens 0 440
ENST00000532125 FOXRED1-001 protein_coding Homo_sapiens 0 1074
ENST00000532590 FOXRED1-017 retained_intron Homo_sapiens 0 372
ENST00000533395 FOXRED1-016 retained_intron Homo_sapiens 0 287
ENST00000534011 FOXRED1-006 processed_transcript Homo_sapiens 0 1050
ENST00000534315 FOXRED1-007 retained_intron Homo_sapiens 0 778

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