C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143118 Rab3a-005 ENSMUSG00000031840 10090 + 8:70754703-70757262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000143118
Transcript ID Brain Ovary Testis
ENSMUST00000143118 534.536±0.00 18.454±0.00 3.881±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BA CIL_0006BA_0002 CGP 8:70723720-70758677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0003016 IMP respiratory system process
GO:0005515 IPI protein binding
GO:0007005 IMP mitochondrion organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007409 IMP axonogenesis
GO:0008021 IDA synaptic vesicle
GO:0009791 IMP post-embryonic development
GO:0016079 IMP synaptic vesicle exocytosis
GO:0016188 IMP synaptic vesicle maturation
GO:0017157 IDA regulation of exocytosis
GO:0030324 IMP lung development
GO:0031630 IMP regulation of synaptic vesicle fusion to presynaptic membrane
GO:0048790 IMP maintenance of presynaptic active zone structure
GO:0050975 IMP sensory perception of touch
GO:0051602 IMP response to electrical stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000132687 rab3c-001 protein_coding Danio_rerio 0 255
ENST00000222120 RAB3D-001 protein_coding Homo_sapiens 0 309
ENST00000222256 RAB3A-001 protein_coding Homo_sapiens 0 464
ENST00000481914 RAB3A-003 protein_coding Homo_sapiens 0 292
ENST00000515410 RAB3A-004 retained_intron Homo_sapiens 3e-30 135
ENST00000589655 RAB3D-002 protein_coding Homo_sapiens 0 309

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