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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143280  |
Smg8-002 |
ENSMUSG00000020495 |
10090 | - |
11:87077736-87085382  |
protein_coding |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00039L | CIL_00039L_0002 | CGP | 11:87077732-87108708 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000184 | IEA | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000300917
|
SMG8-201 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000543872
|
SMG8-001 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000577660
|
CTD-2510F5.6-001 | protein_coding | Homo_sapiens | 0 | 348 |
|
ENST00000578922
|
SMG8-002 | protein_coding | Homo_sapiens | 0 | 525 |
|
ENST00000580498
|
SMG8-005 | processed_transcript | Homo_sapiens | 0 | 416 |
|
ENST00000582469
|
SMG8-003 | protein_coding | Homo_sapiens | 0 | 1277 |
