| Transcript ID | Brain | Breast | Liver | Lung |
|---|---|---|---|---|
| ENST00000543872 | 0.545±0.00 | 1.359±0.00 | 0.529±0.00 | 0.328±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SMG8 nonsense mediated mRNA decay factor | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000543872  |
SMG8-001 |
ENSG00000167447 |
9606 | + |
17:59209400-59215239  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000184 | IMP:IEA | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0005515 | IPI | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0005829 | TAS | cytosol |
| GO:0010467 | TAS | gene expression |
| GO:0016070 | TAS | RNA metabolic process |
| GO:0016071 | TAS | mRNA metabolic process |
| GO:0045859 | IMP | regulation of protein kinase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000020801
|
Smg8-001 | protein_coding | Mus_musculus | 0 | 3746 |
|
ENSMUST00000143280
|
Smg8-002 | protein_coding | Mus_musculus | 0 | 937 |
