C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143465 Hdac10-003 ENSMUSG00000062906 10090 - 15:89123309-89128651 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143465 3.732±0.35 3.184±0.64 6.193±0.00 2.445±1.29 7.960±0.95 3.962±1.14 1.429±0.33 2.300±0.53 1.946±0.37 5.163±0.36 0.618±0.10 5.966±3.27 1.328±0.10 0.781±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700
CIL_0006L4 CIL_0006L4_0002 CGP 15:89123307-89140703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216271 HDAC10-001 protein_coding Homo_sapiens 0 1068
ENST00000349505 HDAC10-008 protein_coding Homo_sapiens 0 701
ENST00000415993 HDAC10-002 nonsense_mediated_decay Homo_sapiens 0 568
ENST00000448072 HDAC10-005 protein_coding Homo_sapiens 0 715
ENST00000454936 HDAC10-007 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000483222 HDAC10-004 processed_transcript Homo_sapiens 0 204
ENST00000498366 HDAC10-003 processed_transcript Homo_sapiens 0 490

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