C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBA-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143873 Ubald1-002 ENSMUSG00000039568 10090 - 16:4874788-4879805 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000143873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000143873 2.695±0.62 1.838±0.12 2.624±0.30 1.480±0.19 3.044±0.24 2.237±0.33 1.318±0.14 1.366±0.24 0.732±0.22 3.730±0.23 1.010±0.19 2.693±0.66 1.110±0.31 3.249±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010C CIL_00010C_0002 CGP 16:4835416-4880315
CIL_0007IF CIL_0007IF_0003 CGP 16:4874778-4938296

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283474 UBALD1-001 protein_coding Homo_sapiens 0 560
ENST00000327490 UBALD2-001 protein_coding Homo_sapiens 6e-37 159
ENST00000587615 UBALD1-013 protein_coding Homo_sapiens 0 455
ENST00000587649 UBALD1-010 protein_coding Homo_sapiens 0 270
ENST00000588691 UBALD1-012 non_stop_decay Homo_sapiens 4e-27 124
ENST00000590891 UBALD1-005 protein_coding Homo_sapiens 0 592
ENST00000590965 UBALD1-003 protein_coding Homo_sapiens 0 560
ENST00000591113 UBALD1-011 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000591401 UBALD1-002 protein_coding Homo_sapiens 0 562
ENST00000591897 UBALD1-004 protein_coding Homo_sapiens 0 560

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