C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase, iron containing, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144177 Adhfe1-001 ENSMUSG00000025911 10090 + 1:9547948-9577970 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000144177
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000144177 5.080±0.00 1.481±0.04 5.586±0.03 0.319±0.05 3.666±0.78 12.596±0.86 4.376±2.32 1.285±0.04 1.884±0.39 0.723±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GC CIL_0003GC_0002 CGP 1:9545408-9580673
CIL_00031D CIL_00031D_0002 CGP 1:9547948-9627143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0015993 ISS molecular hydrogen transport
GO:0046872 IEA metal ion binding
GO:0047988 ISS hydroxyacid-oxoacid transhydrogenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276576 ADHFE1-003 nonsense_mediated_decay Homo_sapiens 0 1424
ENST00000396621 ADHFE1-005 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000396623 ADHFE1-001 protein_coding Homo_sapiens 0 1548
ENST00000415254 ADHFE1-004 protein_coding Homo_sapiens 0 1515
ENST00000419955 ADHFE1-009 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000422166 ADHFE1-008 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000424777 ADHFE1-002 nonsense_mediated_decay Homo_sapiens 0 955
ENST00000426810 ADHFE1-006 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000463261 ADHFE1-014 retained_intron Homo_sapiens 0.0000000003 69
ENST00000466920 ADHFE1-010 retained_intron Homo_sapiens 0 202
ENST00000480040 ADHFE1-015 processed_transcript Homo_sapiens 0 455
ENST00000496501 ADHFE1-007 processed_transcript Homo_sapiens 0 1349
ENST00000518781 ADHFE1-017 processed_transcript Homo_sapiens 0.0000000005 69

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