C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein, transmembrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144213 Rnft2-005 ENSMUSG00000032850 10090 - 5:118236927-118242921 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENSMUST00000144213
Transcript ID Colon Liver
ENSMUST00000144213 0.641±0.00 0.097±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YS CIL_0004YS_0002 CGP 5:118190736-118266093

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257575 RNFT2-001 protein_coding Homo_sapiens 0 568
ENST00000319176 RNFT2-004 protein_coding Homo_sapiens 0 568
ENST00000392549 RNFT2-201 protein_coding Homo_sapiens 0 568
ENST00000407967 RNFT2-002 protein_coding Homo_sapiens 0 568
ENST00000547718 RNFT2-003 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000622220 RNFT2-202 protein_coding Homo_sapiens 0 568

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