C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone cell cycle regulation defective homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144609 Hira-005 ENSMUSG00000022702 10090 + 16:18877270-18910743 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0005F0 CIL_0005F0_0002 CGP 16:18836584-18956247

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263208 HIRA-001 protein_coding Homo_sapiens 0 593
ENST00000340170 HIRA-002 protein_coding Homo_sapiens 0 588
ENST00000452818 HIRA-004 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000464189 HIRA-003 processed_transcript Homo_sapiens 0 348
ENST00000509549 C22orf39-003 nonsense_mediated_decay Homo_sapiens 0 442

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