C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A interacting protein (rabin3)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144788 Rab3il1-002 ENSMUSG00000024663 10090 + 19:10018194-10038380 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000144788
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000144788 0.965±0.12 2.651±0.00 0.959±0.00 0.676±0.00 0.192±0.00 0.755±0.00 0.370±0.07 2.600±0.76 0.514±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000056 CIL_000056_0002 CGP 19:9985174-10038380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0015031 IEA protein transport
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 ISS positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301773 RAB3IL1-002 protein_coding Homo_sapiens 0 363
ENST00000394836 RAB3IL1-001 protein_coding Homo_sapiens 0 1227
ENST00000531922 RAB3IL1-003 protein_coding Homo_sapiens 0 603

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