C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 3, subfamily a, polypeptide 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145062 Cyp3a25-002 ENSMUSG00000029630 10090 - 5:145977194-146009618 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000145062
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000145062 0.093±0.07 0.251±0.09 0.149±0.03 0.028±0.00 0.023±0.00 26.906±27.35 0.075±0.00 0.031±0.02 0.112±0.00 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LC CIL_0005LC_000A CGP 5:145854426-146009618
CIL_0005LC CIL_0005LC_0007 CGP 5:145977194-146113285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0016712 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222382 CYP3A43-014 protein_coding Homo_sapiens 0 470
ENST00000312017 CYP3A43-013 protein_coding Homo_sapiens 0 324
ENST00000336411 CYP3A4-001 protein_coding Homo_sapiens 0 592
ENST00000342499 CYP3A43-201 protein_coding Homo_sapiens 0 484
ENST00000354593 CYP3A4-201 protein_coding Homo_sapiens 0 592
ENST00000354829 CYP3A43-001 protein_coding Homo_sapiens 0 484
ENST00000415413 CYP3A43-006 protein_coding Homo_sapiens 0 414
ENST00000417625 CYP3A43-003 protein_coding Homo_sapiens 0 414
ENST00000433277 CYP3A43-009 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000434806 CYP3A43-012 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000436834 CYP3A43-002 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000444905 CYP3A43-005 protein_coding Homo_sapiens 0 254
ENST00000463915 CYP3A43-004 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000472352 CYP3A43-015 retained_intron Homo_sapiens 0 255
ENST00000477658 CYP3A43-007 processed_transcript Homo_sapiens 0 254
ENST00000481362 CYP3A43-011 retained_intron Homo_sapiens 0 414
ENST00000491648 CYP3A43-010 processed_transcript Homo_sapiens 0 414
ENST00000495115 CYP3A43-008 processed_transcript Homo_sapiens 0 246

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