C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDX1 C-terminal inhibiting factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145327 Pcif1-002 ENSMUSG00000039849 10090 + 2:164879304-164883199 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENSMUST00000145327
Transcript ID Adrenal Liver
ENSMUST00000145327 56.821±10.50 12.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IV CIL_0006IV_0003 CGP 2:164839518-164894454
CIL_0006GO CIL_0006GO_0002 CGP 2:164879304-164911757

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372409 PCIF1-001 protein_coding Homo_sapiens 0 388
ENST00000616084 PCIF1-003 processed_transcript Homo_sapiens 0 272

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