C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin G associated kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145467 Gak-003 ENSMUSG00000062234 10090 - 5:108569420-108629739 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000145467
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000145467 3.343±0.00 4.129±0.56 4.386±0.73 7.952±1.65 1.233±0.15 2.294±0.43 5.086±0.17 0.621±0.20 4.466±0.96 1.400±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LS CIL_0006LS_0002 CGP 5:108518554-108629739
CIL_0001Y1 CIL_0001Y1_0002 CGP 5:108569411-108647770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007029 IMP endoplasmic reticulum organization
GO:0007030 IMP Golgi organization
GO:0009913 IMP epidermal cell differentiation
GO:0035622 IMP intrahepatic bile duct development
GO:0048468 IMP cell development
GO:0048853 IMP forebrain morphogenesis
GO:0061436 IMP establishment of skin barrier
GO:0072318 IGI clathrin coat disassembly
GO:0072583 IMP clathrin-mediated endocytosis
GO:2000179 IMP positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314167 GAK-001 protein_coding Homo_sapiens 0 2401
ENST00000502656 GAK-020 protein_coding Homo_sapiens 0 270
ENST00000502799 GAK-013 retained_intron Homo_sapiens 7e-28 130
ENST00000504668 GAK-024 nonsense_mediated_decay Homo_sapiens 3e-28 130
ENST00000504947 GAK-023 retained_intron Homo_sapiens 0 257
ENST00000505819 GAK-003 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000507124 GAK-017 retained_intron Homo_sapiens 0 248
ENST00000507580 GAK-022 nonsense_mediated_decay Homo_sapiens 5.00264e-43 178
ENST00000507991 GAK-021 retained_intron Homo_sapiens 2.99878e-43 178
ENST00000509566 GAK-008 processed_transcript Homo_sapiens 0 782
ENST00000510022 GAK-014 processed_transcript Homo_sapiens 0 302
ENST00000511163 GAK-002 protein_coding Homo_sapiens 0 2401
ENST00000511229 GAK-015 protein_coding Homo_sapiens 0 303
ENST00000511345 GAK-012 retained_intron Homo_sapiens 1e-27 130
ENST00000511980 GAK-011 protein_coding Homo_sapiens 5e-28 130
ENST00000512325 GAK-019 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000513935 GAK-018 retained_intron Homo_sapiens 0 348
ENST00000515868 GAK-009 retained_intron Homo_sapiens 1e-27 130
ENST00000618573 GAK-201 protein_coding Homo_sapiens 3e-24 117

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