C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145796 Tmem52-003 ENSMUSG00000023153 10090 + 4:155469147-155470789 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000145796
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000145796 0.325±0.00 11.564±6.24 0.147±0.02 0.052±0.00 2.314±2.39 0.513±0.15 0.481±0.35 1.118±0.46 0.494±0.10 6.808±1.47 1.981±0.75 0.123±0.08 2.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310991 TMEM52-001 protein_coding Homo_sapiens 0 424
ENST00000378598 TMEM52-005 protein_coding Homo_sapiens 2e-36 156
ENST00000416272 TMEM52-002 protein_coding Homo_sapiens 0 191
ENST00000470931 TMEM52-003 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000602604 TMEM52-006 retained_intron Homo_sapiens 2e-24 117

Loading