C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 2, group C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146175 Nr2c2-003 ENSMUSG00000005893 10090 + 6:92139796-92168668 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146175 8.701±2.43 5.651±2.88 3.364±0.12 7.373±1.82 9.252±2.12 7.226±1.23 4.857±0.32 7.069±0.61 2.700±0.69 9.761±0.58 3.047±0.20 9.628±2.33 3.078±0.94 6.197±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AG CIL_0005AG_0002 CGP 6:91978878-92173057
CIL_0005AF CIL_0005AF_0002 CGP 6:92091390-92184033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0051321 IMP meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011597 nr2c2-201 protein_coding Danio_rerio 0 551
ENSDART00000125232 nr2c2-001 protein_coding Danio_rerio 0 551
ENST00000323373 NR2C2-001 protein_coding Homo_sapiens 0 2019
ENST00000393102 NR2C2-004 protein_coding Homo_sapiens 0 2169
ENST00000406272 NR2C2-201 protein_coding Homo_sapiens 0 2132
ENST00000413118 NR2C2-006 protein_coding Homo_sapiens 0 350
ENST00000413194 NR2C2-012 protein_coding Homo_sapiens 0 375
ENST00000425241 NR2C2-002 protein_coding Homo_sapiens 0 2169
ENST00000435454 NR2C2-008 protein_coding Homo_sapiens 8e-36 154
ENST00000437120 NR2C2-009 protein_coding Homo_sapiens 0 684
ENST00000439011 NR2C2-011 protein_coding Homo_sapiens 0 481
ENST00000475707 NR2C2-003 retained_intron Homo_sapiens 0 2019
ENST00000478572 NR2C2-005 processed_transcript Homo_sapiens 0 952
ENST00000495282 NR2C2-010 retained_intron Homo_sapiens 0 291
ENST00000617312 NR2C2-202 protein_coding Homo_sapiens 0 2019

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