C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myotubularin related protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146213 Mtmr1-002 ENSMUSG00000015214 10090 + X:71364760-71388756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000146213
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000146213 11.640±6.38 5.486±0.94 3.679±1.44 5.309±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PJ CIL_0000PJ_0003 CGP X:71210767-71419196
CIL_0007GF CIL_0007GF_0003 CGP X:71364760-71492849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004438 IDA phosphatidylinositol-3-phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016311 IDA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370390 MTMR1-013 protein_coding Homo_sapiens 0 614
ENST00000429965 MTMR1-005 protein_coding Homo_sapiens 0 399
ENST00000434699 MTMR1-010 protein_coding Homo_sapiens 0 399
ENST00000436701 MTMR1-007 protein_coding Homo_sapiens 0 370
ENST00000438018 MTMR1-006 protein_coding Homo_sapiens 0 436
ENST00000439546 MTMR1-009 protein_coding Homo_sapiens 0 399
ENST00000445323 MTMR1-002 protein_coding Homo_sapiens 0 697
ENST00000485376 MTMR1-001 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000488357 MTMR1-003 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000490316 MTMR1-008 protein_coding Homo_sapiens 0 586
ENST00000493480 MTMR1-011 retained_intron Homo_sapiens 0 276
ENST00000493995 MTMR1-012 protein_coding Homo_sapiens 0 608
ENST00000542156 MTMR1-201 protein_coding Homo_sapiens 0 573

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