C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pogo transposable element with KRAB domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148243 Pogk-004 ENSMUSG00000040596 10090 - 1:166395397-166409787 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyOvaryTestisENSMUST00000148243
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Ovary Testis
ENSMUST00000148243 3.028±0.54 5.848±0.88 6.269±3.83 1.919±0.46 1.594±0.13 2.299±0.00 6.588±0.87 2.024±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367875 POGK-003 protein_coding Homo_sapiens 0 1707
ENST00000367876 POGK-001 protein_coding Homo_sapiens 0 1707

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