C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4932438A13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148698 4932438A13Rik-004 ENSMUSG00000037270 10090 + 3:37024426-37037840 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonENSMUST00000148698
Transcript ID Adrenal Colon
ENSMUST00000148698 3.203±0.00 2.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AC CIL_0007AC_0002 CGP 3:36620482-37053033
CIL_0007AD CIL_0007AD_0002 CGP 3:36863106-37121924

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000090000 si:ch211-233a24.2-201 protein_coding Danio_rerio 0 281
ENSDART00000145834 si:ch211-233a24.2-003 retained_intron Danio_rerio 1e-38 167
ENST00000264501 KIAA1109-001 protein_coding Homo_sapiens 0 1138
ENST00000306802 KIAA1109-009 protein_coding Homo_sapiens 0 2143
ENST00000388738 KIAA1109-201 protein_coding Homo_sapiens 0 1138
ENST00000438707 KIAA1109-010 protein_coding Homo_sapiens 0 2143
ENST00000442707 KIAA1109-008 protein_coding Homo_sapiens 0 704
ENST00000480651 KIAA1109-013 retained_intron Homo_sapiens 0 929
ENST00000483357 KIAA1109-014 processed_transcript Homo_sapiens 0 444

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