C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149129 Plod1-005 ENSMUSG00000019055 10090 - 4:147915797-147921096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaENSMUST00000149129
Transcript ID Brain Breast Ovary Placenta
ENSMUST00000149129 4.921±0.00 9.503±0.00 14.024±0.00 28.672±2.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000196061 PLOD1-001 protein_coding Homo_sapiens 0 599
ENST00000470133 PLOD1-010 retained_intron Homo_sapiens 0 272
ENST00000491536 PLOD1-009 processed_transcript Homo_sapiens 0 440

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