C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kaptin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149388 Kptn-004 ENSMUSG00000006021 10090 + 7:16120219-16123854 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000149388
Transcript ID Breast
ENSMUST00000149388 2.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338134 KPTN-001 protein_coding Homo_sapiens 0 492
ENST00000594139 KPTN-006 retained_intron Homo_sapiens 0 418
ENST00000594208 KPTN-002 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000595484 KPTN-003 processed_transcript Homo_sapiens 0 429
ENST00000598699 KPTN-008 processed_transcript Homo_sapiens 0 342
ENST00000600271 KPTN-005 protein_coding Homo_sapiens 0 492
ENST00000602193 KPTN-004 processed_transcript Homo_sapiens 0 429

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