C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 4933406J08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149861 4933406J08Rik-002 ENSMUSG00000027229 10090 + 2:122186474-122204961 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149861
Transcript ID Testis
ENSMUST00000149861 1.554±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DM CIL_0004DM_0002 CGP 2:122160700-122206397
CIL_0004DN CIL_0004DN_0002 CGP 2:122186272-122265340

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340827 C15orf43-001 protein_coding Homo_sapiens 0 302
ENST00000557864 C15orf43-003 nonsense_mediated_decay Homo_sapiens 9.99967e-42 174
ENST00000558917 CTD-2014N11.1-001 unprocessed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000559137 C15orf43-002 nonsense_mediated_decay Homo_sapiens 0 302

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