C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SNAP-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149884 Snapin-001 ENSMUSG00000001018 10090 - 3:90488034-90491033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149884 19.021±3.47 67.502±6.11 20.299±2.97 9.980±5.12 22.723±3.37 13.046±0.63 15.828±6.24 10.960±0.80 7.409±0.75 24.949±1.74 11.687±1.34 29.468±10.73 13.382±6.36 10.641±4.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006886 IEA intracellular protein transport
GO:0007268 IMP synaptic transmission
GO:0008021 IEA synaptic vesicle
GO:0008089 IMP anterograde axon cargo transport
GO:0008333 IEA endosome to lysosome transport
GO:0010977 IGI negative regulation of neuron projection development
GO:0016020 IEA membrane
GO:0016079 ISO synaptic vesicle exocytosis
GO:0016188 IMP synaptic vesicle maturation
GO:0017156 TAS calcium ion-dependent exocytosis
GO:0030054 IEA cell junction
GO:0030141 ISS secretory granule
GO:0031083 IDA BLOC-1 complex
GO:0031175 NAS neuron projection development
GO:0031629 IMP synaptic vesicle fusion to presynaptic membrane
GO:0043393 IEA regulation of protein binding
GO:0045202 ISO synapse
GO:0048471 ISS perinuclear region of cytoplasm
GO:0048489 ISS synaptic vesicle transport
GO:0048490 IMP anterograde synaptic vesicle transport
GO:0072553 IMP terminal button organization
GO:0097352 IMP autophagic vacuole maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368685 SNAPIN-001 protein_coding Homo_sapiens 0 577
ENST00000474959 SNAPIN-003 processed_transcript Homo_sapiens 0 296
ENST00000478558 SNAPIN-004 processed_transcript Homo_sapiens 0.000000000005 77

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