C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: FAD-dependent oxidoreductase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151082 Foxred1-006 ENSMUSG00000039048 10090 - 9:35206087-35210946 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000151082
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000151082 9.605±0.00 6.601±0.00 5.585±1.81 2.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017
CIL_0002HQ CIL_0002HQ_0002 CGP 9:35200175-35247973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263578 FOXRED1-002 protein_coding Homo_sapiens 0 673
ENST00000525083 FOXRED1-004 retained_intron Homo_sapiens 1e-32 145
ENST00000525770 FOXRED1-005 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000527004 FOXRED1-003 nonsense_mediated_decay Homo_sapiens 2e-32 145
ENST00000532101 FOXRED1-010 retained_intron Homo_sapiens 0 634
ENST00000532125 FOXRED1-001 protein_coding Homo_sapiens 0 636
ENST00000533395 FOXRED1-016 retained_intron Homo_sapiens 7e-33 145
ENST00000534011 FOXRED1-006 processed_transcript Homo_sapiens 0 416
ENST00000534315 FOXRED1-007 retained_intron Homo_sapiens 2e-32 145

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