C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rabaptin, RAB GTPase binding effector protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151304 Rabep2-002 ENSMUSG00000030727 10090 + 7:126428759-126445901 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000151304
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000151304 3.922±0.39 16.178±3.08 7.188±1.52 1.827±0.68 10.331±0.23 5.682±0.34 0.929±0.32 4.149±0.78 1.576±0.85 5.323±0.11 14.237±3.35 0.912±0.30 3.214±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000557 CIL_000557_0002 CGP 7:126428759-126463108

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357573 RABEP2-006 protein_coding Homo_sapiens 0 785
ENST00000358201 RABEP2-001 protein_coding Homo_sapiens 0 1336
ENST00000544477 RABEP2-002 protein_coding Homo_sapiens 0 1110
ENST00000561803 RABEP2-016 processed_transcript Homo_sapiens 0 411
ENST00000562475 RABEP2-011 processed_transcript Homo_sapiens 0 411
ENST00000562590 RABEP2-005 retained_intron Homo_sapiens 0 1031
ENST00000563577 RABEP2-012 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000564473 RABEP2-010 processed_transcript Homo_sapiens 0 411
ENST00000564579 RABEP2-013 retained_intron Homo_sapiens 0 411
ENST00000567483 RABEP2-007 protein_coding Homo_sapiens 0 767
ENST00000568703 RABEP2-009 protein_coding Homo_sapiens 0 785
ENST00000570030 RABEP2-014 retained_intron Homo_sapiens 0 411

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