C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930594C11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151866 4930594C11Rik-001 ENSMUSG00000087233 10090 - 1:37487193-37488982 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000151866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000151866 0.042±0.02 0.089±0.00 0.313±0.16 0.157±0.06 0.162±0.10 0.721±0.23 0.034±0.01 0.102±0.09 0.023±0.01 0.074±0.03 0.058±0.05 0.309±0.18 3.229±2.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034E CIL_00034E_0002 CGP 1:37430170-37541016
CIL_00034D CIL_00034D_0002 CGP 1:37439340-37720085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340438 GSPT2-001 protein_coding Homo_sapiens 0 1206
ENST00000420576 GSPT1-003 protein_coding Homo_sapiens 0 1629
ENST00000434724 GSPT1-001 protein_coding Homo_sapiens 0 1655
ENST00000439887 GSPT1-002 protein_coding Homo_sapiens 0 1640
ENST00000562794 GSPT1-010 retained_intron Homo_sapiens 0 656
ENST00000563468 GSPT1-005 protein_coding Homo_sapiens 0 1594
ENST00000564790 GSPT1-009 processed_transcript Homo_sapiens 0 604
ENST00000565267 GSPT1-004 protein_coding Homo_sapiens 0 1315
ENST00000568849 GSPT1-006 protein_coding Homo_sapiens 0 590

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