C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G1 to S phase transition 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340438 GSPT2-001 ENSG00000189369 9606 + X:51743431-51746232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340438 2.424±0.00 3.590±0.00 0.808±0.00 3.532±0.99 2.148±0.85 1.582±0.42 1.588±0.93 3.376±0.98 2.049±0.46 1.317±0.45 0.466±0.16 4.842±2.66 1.940±0.85 9.620±2.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005829 TAS cytosol
GO:0006184 IEA GTP catabolic process
GO:0006412 TAS translation
GO:0006415 TAS translational termination
GO:0007049 IEA cell cycle
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096368 Gspt2-001 protein_coding Mus_musculus 0 2438
ENSMUST00000080030 Gspt1-002 protein_coding Mus_musculus 0 2087
ENSMUST00000167571 Gspt1-001 protein_coding Mus_musculus 0 2067
ENSMUST00000151866 4930594C11Rik-001 processed_pseudogene Mus_musculus 0 1206
ENSMUST00000164098 Gspt1-004 retained_intron Mus_musculus 0 656
ENSMUST00000167025 Gspt1-005 protein_coding Mus_musculus 0 505
ENSMUST00000166063 Gspt1-003 retained_intron Mus_musculus 0 501

Loading